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Using machine learning to identify risk factors for pancreatic cancer: a retrospective cohort study of real-world data

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机构: [1]West China School of Pharmacy, Sichuan University, Chengdu, China. [2]Department of Pharmacy, West China Hospital, Sichuan University, Chengdu, China. [3]Department of Biotherapy, Cancer Center and State Key Laboratory of Biotherapy, West China Hospital, Sichuan University, Chengdu, China. [4]Institute of Medical Information, Chinese Academy of Medical Sciences/Peking Union Medical College, Beijing, China. [5]University of Florida Health Shands Hospital, Gainesville, FL, United States. [6]National Chengdu Center for Safety Evaluation of Drugs, State Key Laboratory of Biotherapy, West China Hospital, Sichuan University, Chengdu, China.
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关键词: pancreatic cancer machine learning multivariable logistic regression risk factors KRAS gene mutation

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This study aimed to identify the risk factors for pancreatic cancer through machine learning.We investigated the relationships between different risk factors and pancreatic cancer using a real-world retrospective cohort study conducted at West China Hospital of Sichuan University. Multivariable logistic regression, with pancreatic cancer as the outcome, was used to identify covariates associated with pancreatic cancer. The machine learning model extreme gradient boosting (XGBoost) was adopted as the final model for its high performance. Shapley additive explanations (SHAPs) were utilized to visualize the relationships between these potential risk factors and pancreatic cancer.The cohort included 1,982 patients. The median ages for pancreatic cancer and nonpancreatic cancer groups were 58.1 years (IQR: 51.3-64.4) and 57.5 years (IQR: 49.5-64.9), respectively. Multivariable logistic regression indicated that kirsten rats arcomaviral oncogene homolog (KRAS) gene mutation, hyperlipidaemia, pancreatitis, and pancreatic cysts are significantly correlated with an increased risk of pancreatic cancer. The five most highly ranked features in the XGBoost model were KRAS gene mutation status, age, alcohol consumption status, pancreatitis status, and hyperlipidaemia status.Machine learning algorithms confirmed that KRAS gene mutation, hyperlipidaemia, and pancreatitis are potential risk factors for pancreatic cancer. Additionally, the coexistence of KRAS gene mutation and pancreatitis, as well as KRAS gene mutation and pancreatic cysts, is associated with an increased risk of pancreatic cancer. Our findings offered valuable implications for public health strategies targeting the prevention and early detection of pancreatic cancer.Copyright © 2024 Su, Tang, Zhang, Ni, Huang, Liu, Xiao, Zhu and Zhao.

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大类 | 2 区 医学
小类 | 2 区 药学
第一作者:
第一作者机构: [1]West China School of Pharmacy, Sichuan University, Chengdu, China. [2]Department of Pharmacy, West China Hospital, Sichuan University, Chengdu, China. [3]Department of Biotherapy, Cancer Center and State Key Laboratory of Biotherapy, West China Hospital, Sichuan University, Chengdu, China.
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通讯机构: [3]Department of Biotherapy, Cancer Center and State Key Laboratory of Biotherapy, West China Hospital, Sichuan University, Chengdu, China. [6]National Chengdu Center for Safety Evaluation of Drugs, State Key Laboratory of Biotherapy, West China Hospital, Sichuan University, Chengdu, China.
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