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Single-cell transcriptomic analysis identifies downregulated phosphodiesterase 8B as a novel oncogene in IDH-mutant glioma

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机构: [1]Univ Elect Sci & Technol China, Sichuan Acad Med Sci, Dept Neurosurg, Chengdu, Peoples R China [2]Univ Elect Sci & Technol China, Sichuan Prov Peoples Hosp, Chengdu, Peoples R China [3]Univ Elect Sci & Technol China, Sichuan Acad Med Sci, Dept Acad Journal, Chengdu, Peoples R China [4]Univ Elect Sci & Technol China, Sichuan Prov Peoples Hosp, Sch Med, Dept Crit Care Med, Chengdu, Peoples R China [5]Univ Elect Sci & Technol China, Sichuan Prov Peoples Hosp, Dept Hlth Management, Chengdu, Sichuan, Peoples R China [6]Univ Elect Sci & Technol China, Sichuan Prov Peoples Hosp, Key Lab Human Dis Gene Study Sichuan Prov, Chengdu, Sichuan, Peoples R China [7]Univ Elect Sci & Technol China, Inst Lab Med, Chengdu, Sichuan, Peoples R China [8]Baylor Coll Med, Dept Neurosci, Houston, TX 77030 USA [9]Sichuan Acad Med Sci, Ctr Organ Transplantat, Clin Immunol Translat Med Key Lab Sichuan Prov, Chengdu, Peoples R China [10]Sichuan Prov Peoples Hosp, Chengdu, Peoples R China
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关键词: oligoastrocytoma glioblastoma multiforme cell-of-origin metabolism pathways clinical significance phosphodiesterase 8B (PDE8B)

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Introduction Glioma, a prevalent and deadly brain tumor, is marked by significant cellular heterogeneity and metabolic alterations. However, the comprehensive cell-of-origin and metabolic landscape in high-grade (Glioblastoma Multiforme, WHO grade IV) and low-grade (Oligoastrocytoma, WHO grade II) gliomas remains elusive.Methods In this study, we undertook single-cell transcriptome sequencing of these glioma grades to elucidate their cellular and metabolic distinctions. Following the identification of cell types, we compared metabolic pathway activities and gene expressions between high-grade and low-grade gliomas.Results Notably, astrocytes and oligodendrocyte progenitor cells (OPCs) exhibited the most substantial differences in both metabolic pathways and gene expression, indicative of their distinct origins. The comprehensive analysis identified the most altered metabolic pathways (MCPs) and genes across all cell types, which were further validated against TCGA and CGGA datasets for clinical relevance.Discussion Crucially, the metabolic enzyme phosphodiesterase 8B (PDE8B) was found to be exclusively expressed and progressively downregulated in astrocytes and OPCs in higher-grade gliomas. This decreased expression identifies PDE8B as a metabolism-related oncogene in IDH-mutant glioma, marking its dual role as both a protective marker for glioma grading and prognosis and as a facilitator in glioma progression.

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基金编号: 81802504 2021YFS0380 2023YFS0107 2023YFS0106 2023YFH0010 23LCYJ035

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大类 | 2 区 医学
小类 | 2 区 免疫学
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大类 | 2 区 医学
小类 | 2 区 免疫学
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Q1 IMMUNOLOGY
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Q1 IMMUNOLOGY

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第一作者机构: [1]Univ Elect Sci & Technol China, Sichuan Acad Med Sci, Dept Neurosurg, Chengdu, Peoples R China [2]Univ Elect Sci & Technol China, Sichuan Prov Peoples Hosp, Chengdu, Peoples R China
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通讯机构: [4]Univ Elect Sci & Technol China, Sichuan Prov Peoples Hosp, Sch Med, Dept Crit Care Med, Chengdu, Peoples R China [5]Univ Elect Sci & Technol China, Sichuan Prov Peoples Hosp, Dept Hlth Management, Chengdu, Sichuan, Peoples R China [6]Univ Elect Sci & Technol China, Sichuan Prov Peoples Hosp, Key Lab Human Dis Gene Study Sichuan Prov, Chengdu, Sichuan, Peoples R China [7]Univ Elect Sci & Technol China, Inst Lab Med, Chengdu, Sichuan, Peoples R China [9]Sichuan Acad Med Sci, Ctr Organ Transplantat, Clin Immunol Translat Med Key Lab Sichuan Prov, Chengdu, Peoples R China [10]Sichuan Prov Peoples Hosp, Chengdu, Peoples R China
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