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Recent developments in application of single-cell RNA sequencing in the tumour immune microenvironment and cancer therapy

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收录情况: ◇ 统计源期刊 ◇ CSCD-C ◇ 卓越:梯队期刊

机构: [1]Department of Thyroid and Parathyroid Surgery, Laboratory of Thyroidand Parathyroid Disease, Frontiers Science Centre for Disease‑Related MolecularNetwork, Department of General Surgery, West China Hospital, SichuanUniversity, Chengdu 610044, China [2]Department of Oncology, West ChinaSchool of Public Health and West China Fourth Hospital, Sichuan University,Chengdu 610044, China [3]Department of Rheumatology and Immunology,Rare Diseases Centre, West China Hospital, Sichuan University,Chengdu 610044, China [4]College of Computer Science, Sichuan University,Chengdu 610065, China [5]State Key Laboratory of Biotherapy and CancerCentre, West China Hospital, Sichuan University and Collaborative InnovationCentre, Chengdu 610044, China [6]School of Life Sciences, Gwangju Instituteof Science and Technology (GIST), Gwangju 61005, Republic of Korea
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关键词: Single-cell RNA sequencing (scRNA-seq) Tumour immune microenvironment (TIME) Trajectory Cellular interactions Therapeutic targets

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The advent of single-cell RNA sequencing (scRNA-seq) has provided insight into the tumour immune microenvironment (TIME). This review focuses on the application of scRNA-seq in investigation of the TIME. Over time, scRNA-seq methods have evolved, and components of the TIME have been deciphered with high resolution. In this review, we first introduced the principle of scRNA-seq and compared different sequencing approaches. Novel cell types in the TIME, a continuous transitional state, and mutual intercommunication among TIME components present potential targets for prognosis prediction and treatment in cancer. Thus, we concluded novel cell clusters of cancer-associated fibroblasts (CAFs), T cells, tumour-associated macrophages (TAMs) and dendritic cells (DCs) discovered after the application of scRNA-seq in TIME. We also proposed the development of TAMs and exhausted T cells, as well as the possible targets to interrupt the process. In addition, the therapeutic interventions based on cellular interactions in TIME were also summarized. For decades, quantification of the TIME components has been adopted in clinical practice to predict patient survival and response to therapy and is expected to play an important role in the precise treatment of cancer. Summarizing the current findings, we believe that advances in technology and wide application of single-cell analysis can lead to the discovery of novel perspectives on cancer therapy, which can subsequently be implemented in the clinic. Finally, we propose some future directions in the field of TIME studies that can be aided by scRNA-seq technology.© 2022. The Author(s).

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出版当年[2022]版:
大类 | 1 区 医学
小类 | 1 区 医学:内科
最新[2023]版:
大类 | 2 区 医学
小类 | 2 区 医学:内科
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第一作者机构: [1]Department of Thyroid and Parathyroid Surgery, Laboratory of Thyroidand Parathyroid Disease, Frontiers Science Centre for Disease‑Related MolecularNetwork, Department of General Surgery, West China Hospital, SichuanUniversity, Chengdu 610044, China
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