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Semi-supervised medical image segmentation via uncertainty rectified pyramid consistency.

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机构: [1]School of Mechanical and Electrical Engineering, University of Electronic Science and Technology of China, Chengdu, China [2]Shanghai AI Lab, Shanghai, China [3]Department of Radiation Oncology, Nanfang Hospital, Southern Medical University, Guangzhou, China [4]College of Electronics and Information Engineering, Tongji University, Shanghai, China [5]SenseTime Research, Shanghai, China [6]West China Biomedical Big Data Center, Sichuan University West China Hospital, Chengdu, China [7]Department of Radiation Oncology, Sichuan Cancer Hospital and Institute, University of Electronic Science and Technology of China, Chengdu, China [8]Department of Computer Science, Rutgers University, Piscataway NJ 08854, USA
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关键词: Semi-supervised learning Uncertainty rectifying Pyramid consistency Image segmentation

摘要:
Despite that Convolutional Neural Networks (CNNs) have achieved promising performance in many medical image segmentation tasks, they rely on a large set of labeled images for training, which is expensive and time-consuming to acquire. Semi-supervised learning has shown the potential to alleviate this challenge by learning from a large set of unlabeled images and limited labeled samples. In this work, we present a simple yet efficient consistency regularization approach for semi-supervised medical image segmentation, called Uncertainty Rectified Pyramid Consistency (URPC). Inspired by the pyramid feature network, we chose a pyramid-prediction network that obtains a set of segmentation predictions at different scales. For semi-supervised learning, URPC learns from unlabeled data by minimizing the discrepancy between each of the pyramid predictions and their average. We further present multi-scale uncertainty rectification to boost the pyramid consistency regularization, where the rectification seeks to temper the consistency loss at outlier pixels that may have substantially different predictions than the average, potentially due to upsampling errors or lack of enough labeled data. Experiments on two public datasets and an in-house clinical dataset showed that: 1) URPC can achieve large performance improvement by utilizing unlabeled data and 2) Compared with five existing semi-supervised methods, URPC achieved better or comparable results with a simpler pipeline. Furthermore, we build a semi-supervised medical image segmentation codebase to boost research on this topic: https://github.com/HiLab-git/SSL4MIS.Copyright © 2022. Published by Elsevier B.V.

基金:

基金编号: 81771921 61901084 ] funding and key re- search and development project of Sichuan province China [no. 2020YFG0084

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出版当年[2022]版:
大类 | 1 区 工程技术
小类 | 1 区 工程:生物医学 1 区 核医学 1 区 计算机:人工智能 1 区 计算机:跨学科应用
最新[2023]版:
大类 | 1 区 医学
小类 | 1 区 计算机:人工智能 1 区 计算机:跨学科应用 1 区 工程:生物医学 1 区 核医学
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出版当年[2022]版:
Q1 COMPUTER SCIENCE, ARTIFICIAL INTELLIGENCE Q1 COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS Q1 ENGINEERING, BIOMEDICAL Q1 RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING
最新[2023]版:
Q1 COMPUTER SCIENCE, ARTIFICIAL INTELLIGENCE Q1 COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS Q1 ENGINEERING, BIOMEDICAL Q1 RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING

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第一作者机构: [1]School of Mechanical and Electrical Engineering, University of Electronic Science and Technology of China, Chengdu, China [2]Shanghai AI Lab, Shanghai, China
通讯作者:
通讯机构: [1]School of Mechanical and Electrical Engineering, University of Electronic Science and Technology of China, Chengdu, China [2]Shanghai AI Lab, Shanghai, China
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