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A novel prognostic signature of immune-related lncRNA pairs in lung adenocarcinoma.

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机构: [1]Lung Cancer Center, West China Hospital, Sichuan University, Chengdu 610041, Sichuan, China [2]Department ofRadiation Oncology, Shandong Cancer Hospital and Institute, Shandong First Medical University and ShandongAcademy of Medical Sciences, Jinan 250117, Shandong, China [3]Department of Rheumatology and Immunology,West China Hospital, Sichuan University, Chengdu 610041, Sichuan, China [4]Clinical Research ManagementDepartment, West China Hospital, Sichuan University, Chengdu 610041, Sichuan, China
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摘要:
Lung adenocarcinoma (LUAD) is the most common subtype of lung cancer, but the prognosis of LUAD patients remains unsatisfactory. Here, we retrieved the RNA-seq data of LUAD cohort from The Cancer Genome Atlas (TCGA) database and then identified differentially expressed immune-related lncRNAs (DEirlncRNAs) between LUAD and normal controls. Based on a new method of cyclically single pairing along with a 0-or-1 matrix, we constructed a novel prognostic signature of 8 DEirlncRNA pairs in LUAD with no dependence upon specific expression levels of lncRNAs. This prognostic model exhibited significant power in distinguishing good or poor prognosis of LUAD patients and the values of the area under the curve (AUC) were all over 0.70 in 1, 3, 5 years receiver operating characteristic (ROC) curves. Moreover, the risk score of the model could serve as an independent prognostic factor for patients with LUAD. In addition, the risk model was significantly associated with clinicopathological characteristics, tumor-infiltrating immune cells, immune-related molecules and sensitivity of anti-tumor drugs. This novel signature of DEirlncRNA pairs in LUAD, which did not require specific expression levels of lncRNAs, might be used to guide the administration of patients with LUAD in clinical practice.© 2021. The Author(s).

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出版当年[2021]版:
大类 | 3 区 综合性期刊
小类 | 3 区 综合性期刊
最新[2023]版:
大类 | 2 区 综合性期刊
小类 | 2 区 综合性期刊
第一作者:
第一作者机构: [1]Lung Cancer Center, West China Hospital, Sichuan University, Chengdu 610041, Sichuan, China [2]Department ofRadiation Oncology, Shandong Cancer Hospital and Institute, Shandong First Medical University and ShandongAcademy of Medical Sciences, Jinan 250117, Shandong, China
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